Trainings

Trainings of the “Cycle bioinformatique par la pratique” 2024

Presentation

Each year, the platform proposes its “Bioinformatics through practice” cycle (Archives 2023-2015). This cycle covers a broad spectrum of bioinformatics subjects. All modules include both introduction on concepts and skills and practical activities. The training location is INRAE, Jouy-en-Josas campus, MaIAGE unit meeting room (Bat. 233). You will find here the different ways to come.

This cycle is open to all employees (public or private).

This cycle may not be supported by your Continuous Formation because we do not have a training agreement. You do not have to provide us with an individual training request.

Pricing

Prices depend on your affiliation (INRAE, other academic institutes and universities or private companies) and on the duration of the training.

The price per day is:

  • INRAE: 150 € duty free
  • Academic non INRAE: 170 € + 20% taxes (VAT)
  • Non academic: 550 € + 20% taxes (VAT)

Payment must be proceeded by order form

Planning

Registration generally open in early January. We suggest you subscribe to migale user list to be informed as soon as it opens. You can do it by sending an email to user-migale@groupes.renater.fr.

Information is disseminated through several channels (migale user list, INRAE divisions/centers mailing lists, national IFB and SFBI communication channels…)

How to subscribe?

End of registration

  1. Select a module among those proposed

  1. Establish an order form based on the information received in the pre-registration email

  2. Your registration will be validated upon receipt of your order form

Finished trainings sessions

Trainings

The courses below will be in french! For English courses, see at the bottom of this page

shorttitle Introduction to the R language
Module 12
Duration 2 days
Requirements None
Date March 11-12
Registration
FULL

shorttitle R Graphics with ggplot2
Module 12bis
Duration 1 day
Requirements Experience with the R language
Date March 13
Registration
90 %

shorttitle Shiny application development
Module 26
Duration 1 day
Requirements Be fluent in R
Date March 14
Registration
CANCELLED

shorttitle Shotgun metagenomics
Module 24
Duration 2 days
Requirements Strong experience in Unix
Date March 18-19
Registration
60 %

shorttitle Good practices for a better reproducibility of analyses
Module 25
Duration 1 day
Requirements None
Date March 21
Registration
30 %

shorttitle Introduction to Python
Module 14
Duration 2 days
Requirements None
Date March 26-27
Registration
FULL

shorttitle Tidyverse
Module 12ter
Duration 2 days
Requirements Experience with the R language
Date April 3-4
Registration
50 %

shorttitle Introduction to Galaxy
Module 17
Duration 1 day
Requirements None
Date April 22
Registration
90 %

shorttitle Analysis of NGS data under Galaxy
Module 8bis
Duration 1 day
Requirements Know galaxy use
Date April 23
Registration
60 %

shorttitle Introduction to Galaxy
Module 17
Duration 1 day
Requirements None
Date May 7
Registration
60 %

shorttitle Analysis of RNA-seq data with Galaxy
Module 23
Duration 3 days
Requirements Know galaxy use
Date May 13-15
Registration
70 %

shorttitle Comparison of microbial genomes
Module 9bis
Duration 1 day
Requirements None
Date May 24
Registration
CANCELLED

shorttitle In silico modeling of 3D protein structures…
Module 19
Duration 2 days
Requirements None
Date May 27-28
Registration
FULL

shorttitle Introduction to Linux
Module 1
Duration 1 day
Requirements None
Date May 29
Registration
40 %

shorttitle Statistical analysis of RNA-Seq data with R
Module 16
Duration 2 days
Requirements Be familiar with R
Date June 10-11
Registration
80 %

shorttitle Introduction to text-mining with AlvisNLP
Module 15
Duration 2 days
Requirements Unix experience
Date June 12-13
Registration
30 %

shorttitle Advanced Python
Module 24
Duration 2 days
Requirements Pyhton experience
Date April 2-3
Registration
0 %
No matching items

Special English sessions

These courses will be given in English

A work by Migale Bioinformatics Facility
Université Paris-Saclay, INRAE, MaIAGE, 78350, Jouy-en-Josas, France
Université Paris-Saclay, INRAE, BioinfOmics, MIGALE bioinformatics facility, 78350, Jouy-en-Josas, France